BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029D05SP1|AL429052
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1553 1340 0.0
3x_Contig986 119 1e-26
>3x_Contig1553
Length = 8593
Score = 1340 bits (676), Expect = 0.0
Identities = 679/680 (99%)
Strand = Plus / Plus
Query: 237 tgttggaacaagtcagataaatcgttgtgctctggtacagcgtctggaatggcttcagta 296
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttggaacaagtcagataaatcgtggtgctctggtacagcgtctggaatggcttcagta 60
Query: 297 tgaaccaattgcggtgtatctgcttgtgaagcctctgactgcggcgatacttgtgcatta 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaaccaattgcggtgtatctgcttgtgaagcctctgactgcggcgatacttgtgcatta 120
Query: 357 accgaccttacagagccaattgcctcggcagaagactctaaatgaacatctgtggtctgc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accgaccttacagagccaattgcctcggcagaagactctaaatgaacatctgtggtctgc 180
Query: 417 ggtacaatcgcagattcatctgccgagccattagaagcatgtagccttttctgctttagc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtacaatcgcagattcatctgccgagccattagaagcatgtagccttttctgctttagc 240
Query: 477 ttaagcttcttcttctgattcttccttttcttagcgtctgggcccataactgctttaact 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttaagcttcttcttctgattcttccttttcttagcgtctgggcccataactgctttaact 300
Query: 537 tcttcttctcaacaagctattacaattcccgatcagaaaaaagaaaatagataaaactgg 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcttcttctcaacaagctattacaattcccgatcagaaaaaagaaaatagataaaactgg 360
Query: 597 tacacaataagagcaccagtgaatttagtaactggtcgttaacgcctgatttccaagtgc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tacacaataagagcaccagtgaatttagtaactggtcgttaacgcctgatttccaagtgc 420
Query: 657 tgtagaacgtctattctttgcctttttttctttctgtttccgttctatttacgatgtgat 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtagaacgtctattctttgcctttttttctttctgtttccgttctatttacgatgtgat 480
Query: 717 ttgttcagtatttattaatctgccgtttgcatattcaaatctttggaatcatactgtaaa 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgttcagtatttattaatctgccgtttgcatattcaaatctttggaatcatactgtaaa 540
Query: 777 cacgagagggaaagacagtttattcaaggtcatgtggtacggatatttaattacccggac 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cacgagagggaaagacagtttattcaaggtcatgtggtacggatatttaattacccggac 600
Query: 837 aattaattttcttaacagcttggccaagatactaaatggctaacggtttactatgacggt 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aattaattttcttaacagcttggccaagatactaaatggctaacggtttactatgacggt 660
Query: 897 aaaagaaaaaaagactgaaa 916
||||||||||||||||||||
Sbjct: 661 aaaagaaaaaaagactgaaa 680
>3x_Contig986
Length = 3440
Score = 119 bits (60), Expect = 1e-26
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 1 gatcattaatcacagaaggttgagcttcaactggcatacttcctataactgagtcgggcg 60
||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||
Sbjct: 76 gatcattaatcacagaaggttgagcttcatctggcttacttcttataactgagtcgggcg 17
Query: 61 ctttttcagaag 72
||||||||||||
Sbjct: 16 ctttttcagaag 5
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9005
Number of Sequences: 1807
Number of extensions: 9005
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 2
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)